Published Papers

David Seung, Julien Boudet, Jonathan Monroe, Tina B. Schreier, Laure C. David, Melanie Abt, Kuan-Jen Lu, Martina Zanella, and Samuel C. Zeeman (2017) Homologs of PROTEIN TARGETING TO STARCH Control Starch Granule Initia-tion in Arabidopsis Leaves. The Plant Cell, 29, 1657–1677
Shiea, C.; Huang, Y.-L.; Cheng, S.-C.; Chen, Y.-L.; Shiea, J.* (2017) Determination of elemental composition of metals using ambient organic mass spectrometry. Anal. Chim. Acta, 968, 50-57
Cheng, S.-C.; Chen, S.-H.; Shiea, J.* (2017) Desorption Flame-Induced Atmospheric Pressure Chemical Ionization Mass Spectrometry for Rapid Real-World Sample Analysis. Mass Spectrom. (Tokyo), S0065
Cheng, S.-C.; Bhat, S. M.; Shiea, J.* (2017) Flame Atmospheric Pressure Chemical Ionization Coupled with Negative Electrospray Ionization Mass Spectrometry for Ion Molecule Reactions. J. Am. Soc. Mass Spectrom, 28, 1473-1481
Cheng, S.-C.; Shiea, C.; Huang, Y.-L.; Wang, C.-H.; Cho, Y.-T.; Shiea, J.* (2017) Laser-based ambient mass spectrometry. Anal. Methods, 9, 4924
Yeh Hsuan-Yu, Lin Choun-Sea, de Jong Hans, Chang Song-Bin (2017) Two reported cytotypes of the emergent orchid model species Erycina pusilla are two different species. Euphytica, 213(10), 233-233
W. Li, R.F. Lacey, Y. Ye, J. Lu, K.-C. Yeh, Y. Xiao, L. Li, C.-K. Wen, B.M. Binder, Y. Zhao (2017) Triplin, a small molecule, reveals copper ion transport in ethylene signaling from ATX1 to RAN1. PLOS Genetics, 13(4), e1006703
Vicente J, Mendiondo GM, Movahedi M, Peirats-Llobet M, Juan YT, Shen YY, Dambire C, Smart K, Rodriguez PL, Charng YY, Gray JE, Holdsworth MJ* (2017) The Cys-Arg/N-End Rule Pathway Is a General Sensor of Abiotic Stress in Flowering Plants. Current biology : CB, 27(20), 3183-3190.e4
Lin YP, Charng YY* (2017) Supraoptimal activity of CHLOROPHYLL DEPHYTYLASE1 results in an increase in tocopherol level in mature arabidopsis seeds. Plant Signaling & Behavior, e1382797
Hua, M. D., Senthil Kumar, R., Shyur, L.-F., Cheng, Y.-B., Tian, Z., Oelmüller, R. and Yeh, K.-W. (2017) Metabolomic compounds identified in Piriformospora indica-colonized Chinese cabbage roots delineate symbiotic functions of the interaction. Scientific Reports, 7, 9291
Ho YN, Shu LJ, Yang YL* (2017) Imaging mass spectrometry for metabolites: technical progress, multimodal imaging, and biological interactions. Wiley Interdisciplinary Reviews-Systems Biology and Medicine, 9(5), e1387
Yuan JL, Yue JJ, Gu XP, Lin CS* (2017) Flowering of Woody Bamboo in Tissue Culture Systems. Frontiers in Plant Science, 8, 1589
H.-F. Chang, S.-L. Wang and K.-C. Yeh* (2017) Effect of Gallium Exposure in Arabidopsis thaliana is Similar to Aluminum Stress. Environmental Science and Technology, 51(3), 1241-1248
Lin CS, Chen JJW, Chiu CC, Hsiao HCW, Yang CJ, Jin XH, Leebens-Mack J, de Pamphilis CW, Huang YT, Yang LH, Chang WJ, Kui L, Wong GK, Hu JM, Wang W, Shih MC (2017) Concomitant loss of NDH complex-related genes within chloroplast and nuclear genomes in some orchids. The Plant journal : for cell and molecular biology, 90(5), 994-1006
Chen ST, Liang SM, Li FJ, Yeh YC, Liao WY, Sung PS, Chou TY, Hsiao M, Wong CH and Hsieh SL (2017) CLEC5A is a Critical Innate Immunity Receptor in Host Defense against Listeria Infection. Nature Communication, 8(299),1-13
Shu LJ, Yang YL* (2017) Bacillus Classification Based on Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry-Effects of Culture Conditions. Scientific reports, 7(1), 15546
Su Pai-Hsiang*, Lai Yen-Hsun (2017) A Reliable and Non-destructive Method for Monitoring the Stromal pH in Isolated Chloroplasts Using a Fluorescent pH Probe. Frontiers in Plant Science, 8, 2079
Seonghoe Jang*, Gynheung An, Hsing-Yi Li (2017) Rice leaf angle and grain size are affected by the OsBUL1 transcriptional activator complex. Plant Physiology, 173(1), 688
Chao YT, Yen SH, Yeh JH, Chen WC, Shih MC (2017) Orchidstra 2.0-A Transcriptomics Resource for the Orchid Family. Plant & Cell Physiology, 58(1), e9
Shang, K.-M., Su, T.-H., Lee, W. L., Hsiao, W.-W., Chiou, C.-Y., Ho, B.-Y., Wang, S.-Y., and Shyur, L.-F.* (2017) Novel effect and the mechanistic insights of fruiting body extract of medicinal fungus Antrodia cinnamomea against T47D breast cancer. Phytomedicine, 24, 39-48
Lin CK, Wang YT, Hung EM, Yang YL, Lee JC, Sheu JH, Liaw CC* (2017) Butyrolactones and Diketopiperazines from Marine Microbes: Inhibition Effects on Dengue Virus Type 2 Replication. Planta Medica, 83(01/02),158-163
Seonghoe Jang* (2017) A novel trimeric complex in plant cells that contributes to the lamina inclination of rice. Plant Signaling & Behavior, 12(1), e1274482
Christie N, Myburg AA, Joubert F, Murray SL, Carstens M, Lin YC, Meyer J, Crampton BG, Christensen SA, Ntuli JF, Wighard SS, Van de Peer Y, Berger DK (2017) Systems genetics reveals a transcriptional network associated with susceptibility in the maize-gray leaf spot pathosystem. The Plant journal : for cell and molecular biology, 89(4), 746-763
Po-Yen Chen, Yung-Ting Tsai, Chun-Yeung Ng, Maurice Sun-Ben Ku, Kin-Ying To* (2017) Transformation and characterization of transgenic rice and Cleome spinosa plants carrying the maize phosphoenolpyruvate carboxylase genomic DNA. PLANT CELL TISSUE AND ORGAN CULTURE, 128(3), 509-519
Y. R Shen, H. Y. Wang, Y. C. Kuo, S. C. Shih, C. H. Hsu, Y. R. Chen, S. R. Wu, C. Y. Wang , P. L. Kuo* (2017) SEPT12 phosphorylation results in loss of the septin ring/sperm annulus, defective sperm motility and poor male fertility. PLOS Genetics, 13(3), e1006631
Hayama, R., Sarid-Krebs, L., Richter, R., Fernández, V., Jang, S., Coupland, G.* (2017) PSEUDO RESPONSE REGULATORs stabilize CONSTANS protein to promote flowering in response to day length. The EMBO Journal, 36(7), 904
Seonghoe Jang*, Hsing-Yi Li, Mei-Lin Kuo (2017) Ectopic expression of Arabidopsis FD and FD PARALOGUE in rice results in dwarfism with size reduction of spikelets. Scientific reports, 7, 44477
Ji-Rong Yang, Chieh-Yu Cheng, Chih-Yuan Chen, Chao-Hua Lin, Chuan-Yi Kuo, Hsiang-Yi Huang, Fu-Ting Wu, Yu-Chih Yang, Chia-Ying Wu, Ming-Tsan Liu*, and Pei-Wen Hsiao* (2017) A virus-like particle vaccination strategy expands its tolerance to H3N2 antigenic drift by enhancing neutralizing antibodies against hemagglutinin stalk. Antiviral Research, 140, 62-75
W. C. Yang, T. F. Kuo, T. Y. Chen, S. T. Jiang, K. W. Chen, Y. M. Chiang, Y. J. Hsu, Y. J. Liu, H. M. Chen, K. Yokoyama, K. C. Tsai, H. H. Yeh, Y. R. Chen, M. T. Yang, and C. Y. Yang (2017) Protein disulfide isomerase a4 acts as a novel regulator of cancer growth through the procaspase pathway. ONCOGENE, 36(39), 5484-5496
Shiau, J.-Y., Nakagawa-Goto, K., Kuo-Hsiung Lee, K.-H., Shyur, L.-F.* (2017) Phytoagent deoxyelephantopin derivative inhibits triple negative breast cancer cell activity by inducing oxidative stress-mediated paraptosis-like cell death. Oncotarget, 8(34), 56942-56958
Hsin-Mei Wang, Chii-Gong Tong, Seonghoe Jang* (2017) Current progress in orchid flowering/flower development research. Plant Signaling & Behavior, 12(5), e1322245
Wang HM, Tong CG, Jang S (2017) Current progress in orchid flowering/flower development research. Plant Signaling & Behavior, 12(5), e1322245
Yang, S.-Y., Huang, T.-K., Kuo, H.-F. and Chiou, T.-J.* (2017) Role of vacuoles in phosphorus storage and remobilization. Journal of Experimental Botany, 68 (12), 3045-3055
Y.-T. Chen, Y. Wang and K.-C. Yeh* (2017) Role of root exudates in metal acquisition and tolerance. Current Opinion in Plant Biology, 39, 66-72
Shiau, J.-Y., Chang, Y.-Q., Nakagawa-Goto, K., Kuo-Hsiung Lee, K.-H., Shyur, L.-F.* (2017) Phytoagent deoxyelephantopin and its derivative inhibit triple negative breast cancer cell activity through ROS-mediated exosomal activity and protein functions. Frontiers in Pharmacology, 8, 398
Merret R, Carpenier MC, Favory, JJ, Picart C, Descombin J, Bousquet-Antonelli C, Tillard P, Lejay L, Deragon JM, Charng YY* (2017) Heat-shock protein HSP101 affects the release of ribosomal protein mRNAs for recovery after heat shock. Plant Physiology, 174(2), 1216-1225
Yu-Yi Wu, Bo-Han Hou, Wen-Chi Lee, Shin-Hua Lu, Chen-Jui Yang, Herve Vaucheret, Ho-Ming Chen* (2017) DCL2- and RDR6-dependent transitive silencing of SMXL4 and SMXL5 in Arabidopsis dcl4 mutants causes defective phloem transport and carbohydrate over-accumulation. The Plant Journal, 90(6), 1064-1078
Lin CS*, Chen JJ, Chiu CC, Hsiao HC, Yang CJ, Jin XH, Leebens-Mack J, dePamphilis CW, Huang YT, Yang LH, Chang WJ, Kui L, Wong GK, Hu JM, Wang W, Shih MC* (2017) Concomitant loss of NDH complex-related genes within chloroplast and nuclear genomes in some orchids. The Plant journal : for cell and molecular biology, 90(5), 994-1006
Sasidharan R, Bailey-Serres J, Ashikari M, Atwell BJ, Colmer TD, Fagerstedt K, Fukao T, Geigenberger P, Hebelstrup KH, Hill RD, Holdsworth MJ, Ismail AM, Licausi F, Mustroph A, Nakazono M, Pedersen O, Perata P, Sauter M, Shih MC, Sorrell BK, Striker GG, van Dongen JT, Whelan J, Xiao S, Visser EJ, Voesenek LA (2017) Community recommendations on terminology and procedures used in flooding and low oxygen stress research. The New phytologist, 214(4), 1403-1407
Swee-Suak Ko*, Min-Jeng Li, Yi-Jyun Lin, Hong-Xian Hsing, Ting-Ting Yang, Tien-Kuan Chen, Chung-Min Jhong and Maurice S. Ku (2017) Tightly controlled expression of bHLH142 is essential for timely tapetal programmed cell death and pollen development in rice. Frontiers in Plant Science, 8, 1258
Hsing-Yi Li, Hsin-Mei Wang, Seonghoe Jang* (2017) Rice Lamina Joint Inclination Assay. Bio-Protocol, 7(14), e2409
Seonghoe Jang*, Hsing-Yi Li (2017) Oryza sativa BRASSINOSTEROID UPREGULATED1 LIKE1 Induces the Expression of a Gene Encoding a Small Leucine-Rich-Repeat Protein to Positively Regulate Lamina Inclination and Grain Size in Rice. Frontiers in plant science, 8, 1253
Hsin-Mei Wang, Shih-Tong Jeng and Kin-Ying To* (2017) In vitro regeneration, Agrobacterium-mediated transformation, and genetic assay of chalcone synthase in the medicinal plant Echinacea pallida. PLANT CELL TISSUE AND ORGAN CULTURE, 130(1), 117-130
Bartolome, A.P., Villaseñor, I.M., Lin, Y.L., M. Libardo, D.J., Angeles-Boza, A.M., Yang, W.C. (2017) Cytotoxic property of Streptocaulon baumii extracts and their isolated compounds against different human cancer cell lines. Philippine Science Letters, 10(2), 89-97
Hsiao, P.-Y., Cheng, C.-P., Koh, K.W. and Chan, M.-T.* (2017) The Arabidopsis defensin gene, AtPDF1.1, mediates defence against Pectobacterium carotovorum subs. carotovorum via an iron-withholding defence system.. SCIENTIFIC REPORTS, 6.663194444
Zhang, G.-Q., Liu, K.-W., Li, Z., Lohaus, R., Hsiao, Y.-Y., Niu, S.-C., Wang, J.-Y., Lin, Y.-C., Xu, Q., Chen, L.-J., Yoshida, K., Fujiwara, S., Wang, Z.-W., Zhang, Y.-Q., Mitsuda, N., Wang, M., Liu, G.-H., Pecoraro, L., Huang, H.-X., Xiao, X.-J., Lin, M., Wu, X.-Y., Wu, W.-L., Chen, Y.-Y., Bin Chang, S. -, Sakamoto, S., Ohme-Takagi, M., Yagi, M., Zeng, S.-J., Shen, C.-Y., Yeh, C.-M., Luo, Y.-B., Tsai, W.-C., Van de Peer, Y.*, and Liu, Z.-J.* (2017) The Apostasia genome and the evolution of orchids. Nature, 549(7672), 379-383
Kuo T-F, Chen T-Y, Jiang S-T, Chen K-W, Chiang Y-M, Hsu Y-J, Liu Y-J, Chen H-M, Yokoyama K K, Tsai K-C, Yeh H-H, Chen Y-R, Yang M-T, Yang C-Y, Yang W-C* (2017) Protein disulfide isomerase a4 acts as a novel regulator of cancer growth through the procaspase pathway. Oncogene, 36(39),5484-5496
Lai, C.-P., Huang, L.-M., Chen, L.-F.O., Chan, M.-T., and Shaw, J.-F.* (2017) Genome-wide analysis of GDSL-type esterases/lipases in Arabidopsis. Plant Molecular Biology, 95(1-2),181–197
I. W. Chou, Y. H. Cheng, Y. R. Chen, P. C. H. Hsieh*, K. King (2017) Fenugreek Compound (N55) Lowers Plasma Glucose through the Enhancement of Response of Physiological Glucagon-like peptide-1. Scientific reports, 7(1), 12265
Chien, P.-S., Chiang, C.-B., Wang, Z., Chiou, T.-J.* (2017) MicroRNA-mediated signaling and regulation of nutrient transport and utilization. CURRENT OPINION IN PLANT BIOLOGY, 39, 73-79
Chin-Hsien Tsai, Sheue-Fen Tzeng, Shih-Chuan Hsieh, Chia-Jui Tsai, Yu-Chih Yang, Mong-Hsun Tsai, and Pei-Wen Hsiao* (2017) A Standardized Wedelia chinensis extract overcomes the Feedback activation of HER2/3 signaling upon androgen-ablation in prostate cancer. Frontiers in Pharmacology, 8, 721
Lin JY, Le B., Chen M, Henry KF, Hur J, Hsieh TF, Chen PY, Pelletier JM , Pellegrini M, Fischer RL, Harada JJ, and Goldberg RB* (2017) Similarity between soybean and Arabidopsis seed methylomes and loss of non-CG methylation does not affect seed development. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114(45), E9730-E9739
Huang Chien-Jui, Zheng Po-Xing, Ou Jheng-Yang, Lin Yao-Cheng*, Chen Chao-Ying* (2017) Complete Genome Sequence of Bacillus cereus C1L, a Plant Growth-Promoting Rhizobacterium from the Rhizosphere of Formosa Lily in Taiwan. Genome Announcements, 5(46), e01290-17
Chin-Hsien Tsai, Sheue-Fen Tzeng, Shih-Chuan Hsieh, Yu-Chih Yang, Yi-Wen Hsiao, Mong-Hsun Tsai, and Pei-Wen Hsiao*. (2017) A Standardized Wedelia chinensis extract mitigates tumor inflammation and augments chemotherapy effect of docetaxel in prostate cancer. SCIENTIFIC REPORTS, 7(1), 15624
J. Y. Mao, H. W. LI, S. C. Wei, S. G. Harroun, M. Y. Lee, H. Y. Lin, C. Y. Chung, C. H. Hsu, Y. R. Chen, H. J. Lin*, C. C. Huang (2017) DNA Modulates the Interaction of Genetically Engineered DNA-Binding Proteins and Gold Nanoparticles: Diagnosis of High-Risk HPV Infection. ACS applied materials & interfaces, 9(51), 44307-44315
Yen Ming-Ren, Suen Der-Fen, Hsu Fei-Man, Tsai Yi-Hsiu, Fu Hongyong, Schmidt Wolfgang, Chen Pao-Yang (2017) Deubiquitinating enzyme OTU5 contributes to DNA Methylation Patterns and is Critical for Phosphate Nutrition Signals. Plant Physiology, 175(4), 1826-1838
Wingfield Brenda D., Berger Dave K., Steenkamp Emma T., Lim Hye-Jin, Duong Tuan A., Bluhm Burton H., De Beer Z. Wilhelm, De Vos Lieschen, Fourie G., Naidoo Kershney, Olivier Nicky, Lin Yao-Cheng, Van der Peer Yves, Joubert Fourie, Crampton Bridget G., Swart Velushka, Soal Nicole, Tatham Catherine, Van der Nest Margriet A., Van der Merwe Nicolaas A., van Wyk Stephanie, Wilken P. Markus, Wingfield Michael J.* (2017) Draft genome of Cercospora zeina, Fusarium pininemorale, Hawksworthiomyces lignivorus, Huntiella decipiens and Ophiostoma ips. IMA Fungus, 8(2), 385-396
Yamada M, Han X, Benfey PN (2017) Root meristem Growth Factor 1 (RGF1) controls root meristem size through reactive oxygen species (ROS) signaling. 2017 bioRxiv, doi: https://doi.org/10.1101/244947